STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4K40_4665Unannotated protein. (134 aa)    
Predicted Functional Partners:
C4K40_4664
Unannotated protein.
       0.801
C4K40_1759
Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
    
 
 0.656
C4K40_6125
Unannotated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.645
C4K40_1685
Unannotated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.645
C4K40_1335
Unannotated protein.
  
     0.610
C4K40_4663
Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
    0.602
C4K40_1620
Unannotated protein.
  
    0.552
C4K40_4659
Unannotated protein.
 
  
  0.539
C4K40_1182
Unannotated protein.
 
    0.532
C4K40_4662
Unannotated protein.
  
    0.491
Your Current Organism:
Pseudomonas sp. CMR5c
NCBI taxonomy Id: 658630
Other names: P. sp. CMR5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.