STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGN37285.1Hypothetical protein. (297 aa)    
Predicted Functional Partners:
EGN37287.1
Hypothetical protein; Belongs to the UPF0102 family.
       0.742
EGN37286.1
Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.741
EGN35574.1
Hypothetical protein; Belongs to the P(II) protein family.
 
 
 
 0.513
rnhB
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.505
EGN37290.1
Signal peptidase I; Belongs to the peptidase S26 family.
  
    0.501
EGN37291.1
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.441
EGN35541.1
Hypothetical protein.
     
 0.438
Your Current Organism:
Lachnospiraceae bacterium 1456FAA
NCBI taxonomy Id: 658655
Other names: L. bacterium 1_4_56FAA, Lachnospiraceae bacterium 1_4_56FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.