STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGN36584.1Hypothetical protein; Belongs to the RbsD / FucU family. (148 aa)    
Predicted Functional Partners:
fucI
L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
 
   
 0.850
EGN36586.1
Hypothetical protein.
 
 
  0.741
EGN36589.1
Hypothetical protein.
 
   
 0.637
EGN37291.1
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
 
      0.541
EGN31280.1
Hypothetical protein.
 
   
 0.491
EGN36603.1
Hypothetical protein.
 
     0.479
EGN36583.1
Hypothetical protein.
       0.416
EGN36587.1
Hypothetical protein.
       0.415
Your Current Organism:
Lachnospiraceae bacterium 1456FAA
NCBI taxonomy Id: 658655
Other names: L. bacterium 1_4_56FAA, Lachnospiraceae bacterium 1_4_56FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.