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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC76261.1Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. (317 aa)    
Predicted Functional Partners:
EGC76259.1
Hypothetical protein.
 
 0.991
EGC76260.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.980
EGC76264.1
Hypothetical protein.
 
 
 0.974
EGC75780.1
Hypothetical protein.
 
 0.961
EGC75779.1
Hypothetical protein.
 
 
 0.940
EGC75781.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.912
EGC76262.1
Hypothetical protein.
     
 0.730
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
       0.650
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
  
 0.648
EGC76265.1
Hypothetical protein.
 
     0.607
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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