Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGC74706.1 | EGC74993.1 | HMPREF0490_01586 | HMPREF0490_01281 | Pyruvate:ferredoxin oxidoreductase. | Hypothetical protein. | 0.465 |
EGC74706.1 | EGC76262.1 | HMPREF0490_01586 | HMPREF0490_00008 | Pyruvate:ferredoxin oxidoreductase. | Hypothetical protein. | 0.509 |
EGC74706.1 | EGC76265.1 | HMPREF0490_01586 | HMPREF0490_00011 | Pyruvate:ferredoxin oxidoreductase. | Hypothetical protein. | 0.953 |
EGC74706.1 | EGC76266.1 | HMPREF0490_01586 | HMPREF0490_00012 | Pyruvate:ferredoxin oxidoreductase. | Purine nucleoside phosphorylase I; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.519 |
EGC74706.1 | accD | HMPREF0490_01586 | HMPREF0490_01884 | Pyruvate:ferredoxin oxidoreductase. | Hypothetical protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.957 |
EGC74706.1 | rpoA | HMPREF0490_01586 | HMPREF0490_02224 | Pyruvate:ferredoxin oxidoreductase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.434 |
EGC74706.1 | rpoB | HMPREF0490_01586 | HMPREF0490_01951 | Pyruvate:ferredoxin oxidoreductase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.712 |
EGC74993.1 | EGC74706.1 | HMPREF0490_01281 | HMPREF0490_01586 | Hypothetical protein. | Pyruvate:ferredoxin oxidoreductase. | 0.465 |
EGC74993.1 | EGC76265.1 | HMPREF0490_01281 | HMPREF0490_00011 | Hypothetical protein. | Hypothetical protein. | 0.764 |
EGC76262.1 | EGC74706.1 | HMPREF0490_00008 | HMPREF0490_01586 | Hypothetical protein. | Pyruvate:ferredoxin oxidoreductase. | 0.509 |
EGC76262.1 | EGC76264.1 | HMPREF0490_00008 | HMPREF0490_00010 | Hypothetical protein. | Hypothetical protein. | 0.744 |
EGC76262.1 | EGC76265.1 | HMPREF0490_00008 | HMPREF0490_00011 | Hypothetical protein. | Hypothetical protein. | 0.727 |
EGC76262.1 | EGC76266.1 | HMPREF0490_00008 | HMPREF0490_00012 | Hypothetical protein. | Purine nucleoside phosphorylase I; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.968 |
EGC76262.1 | EGC76267.1 | HMPREF0490_00008 | HMPREF0490_00013 | Hypothetical protein. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.993 |
EGC76264.1 | EGC76262.1 | HMPREF0490_00010 | HMPREF0490_00008 | Hypothetical protein. | Hypothetical protein. | 0.744 |
EGC76264.1 | EGC76265.1 | HMPREF0490_00010 | HMPREF0490_00011 | Hypothetical protein. | Hypothetical protein. | 0.847 |
EGC76264.1 | EGC76266.1 | HMPREF0490_00010 | HMPREF0490_00012 | Hypothetical protein. | Purine nucleoside phosphorylase I; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.782 |
EGC76264.1 | EGC76267.1 | HMPREF0490_00010 | HMPREF0490_00013 | Hypothetical protein. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.818 |
EGC76265.1 | EGC74706.1 | HMPREF0490_00011 | HMPREF0490_01586 | Hypothetical protein. | Pyruvate:ferredoxin oxidoreductase. | 0.953 |
EGC76265.1 | EGC74993.1 | HMPREF0490_00011 | HMPREF0490_01281 | Hypothetical protein. | Hypothetical protein. | 0.764 |
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