Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGC74898.1 | EGC75678.1 | HMPREF0490_01373 | HMPREF0490_00319 | Hypothetical protein. | Hypothetical protein. | 0.480 |
EGC75288.1 | EGC75678.1 | HMPREF0490_00905 | HMPREF0490_00319 | Hypothetical protein. | Hypothetical protein. | 0.401 |
EGC75678.1 | EGC74898.1 | HMPREF0490_00319 | HMPREF0490_01373 | Hypothetical protein. | Hypothetical protein. | 0.480 |
EGC75678.1 | EGC75288.1 | HMPREF0490_00319 | HMPREF0490_00905 | Hypothetical protein. | Hypothetical protein. | 0.401 |
EGC75678.1 | EGC75679.1 | HMPREF0490_00319 | HMPREF0490_00320 | Hypothetical protein. | Hypothetical protein. | 0.710 |
EGC75678.1 | EGC75681.1 | HMPREF0490_00319 | HMPREF0490_00322 | Hypothetical protein. | Hypothetical protein. | 0.472 |
EGC75678.1 | aroA | HMPREF0490_00319 | HMPREF0490_00321 | Hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.661 |
EGC75679.1 | EGC75678.1 | HMPREF0490_00320 | HMPREF0490_00319 | Hypothetical protein. | Hypothetical protein. | 0.710 |
EGC75679.1 | EGC75681.1 | HMPREF0490_00320 | HMPREF0490_00322 | Hypothetical protein. | Hypothetical protein. | 0.543 |
EGC75679.1 | aroA | HMPREF0490_00320 | HMPREF0490_00321 | Hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.773 |
EGC75681.1 | EGC75678.1 | HMPREF0490_00322 | HMPREF0490_00319 | Hypothetical protein. | Hypothetical protein. | 0.472 |
EGC75681.1 | EGC75679.1 | HMPREF0490_00322 | HMPREF0490_00320 | Hypothetical protein. | Hypothetical protein. | 0.543 |
EGC75681.1 | aroA | HMPREF0490_00322 | HMPREF0490_00321 | Hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.995 |
aroA | EGC75678.1 | HMPREF0490_00321 | HMPREF0490_00319 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Hypothetical protein. | 0.661 |
aroA | EGC75679.1 | HMPREF0490_00321 | HMPREF0490_00320 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Hypothetical protein. | 0.773 |
aroA | EGC75681.1 | HMPREF0490_00321 | HMPREF0490_00322 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Hypothetical protein. | 0.995 |