STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC75952.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
EGC75951.1
Hypothetical protein.
 
 
 0.965
EGC75953.1
Hypothetical protein.
 
     0.921
EGC75950.1
Hypothetical protein.
 
  
 0.909
EGC75949.1
Hypothetical protein.
 
   
 0.837
EGC75703.1
Hypothetical protein.
  
  
 0.627
EGC74652.1
Hypothetical protein.
 
 
 0.504
EGC75806.1
Hypothetical protein.
 
 
 0.491
EGC74796.1
Hypothetical protein.
   
  
 0.476
EGC73935.1
Hypothetical protein.
   
  
 0.476
EGC73957.1
Hypothetical protein.
  
 
 0.441
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.