Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC75954.1Hypothetical protein. (1416 aa)    
Predicted Functional Partners:
EGC74113.1
Hypothetical protein.
  
 0.909
EGC75930.1
Hypothetical protein.
 
     0.648
EGC74655.1
Hypothetical protein.
 
     0.603
EGC75955.1
Hypothetical protein.
       0.593
EGC75956.1
Hypothetical protein.
       0.593
EGC75957.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
       0.564
EGC74112.1
Hypothetical protein.
 
   
0.493
EGC75958.1
Hypothetical protein.
       0.476
EGC75004.1
Hypothetical protein.
    
  0.473
EGC75005.1
Hypothetical protein.
    
  0.473
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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