Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC75328.1Hypothetical protein. (480 aa)    
Predicted Functional Partners:
EGC75706.1
Hypothetical protein.
  
 0.944
EGC73542.1
Hypothetical protein.
     
 0.811
EGC75329.1
TIGR01212 family radical SAM protein.
       0.798
EGC74859.1
Hypothetical protein.
  
 0.779
EGC73387.1
Hypothetical protein.
  
     0.774
EGC73798.1
Hypothetical protein.
  
     0.773
EGC73900.1
Hypothetical protein.
  
     0.772
EGC74577.1
Hypothetical protein.
  
     0.771
EGC74583.1
Hypothetical protein.
  
     0.771
EGC74826.1
Hypothetical protein.
  
     0.770
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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