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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC75356.1Hypothetical protein. (760 aa)    
Predicted Functional Partners:
EGC73971.1
Hypothetical protein.
  
  
 0.553
EGC75413.1
Hypothetical protein.
    
  0.542
EGC75315.1
Hypothetical protein; Belongs to the glycosyl hydrolase 1 family.
    
 0.519
EGC73809.1
Hypothetical protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
  
  0.511
EGC76033.1
Hypothetical protein.
    
 0.510
EGC76165.1
Hypothetical protein.
    
 0.502
EGC74285.1
Hypothetical protein; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.479
miaB
Hypothetical protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.473
EGC74284.1
Hypothetical protein.
   
 
 0.451
EGC73787.1
Hypothetical protein; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.435
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.