STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC75228.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
EGC75227.1
Hypothetical protein.
 
 
 0.977
EGC75226.1
Hypothetical protein.
 
  
 0.970
EGC75111.1
Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.874
EGC73909.1
Ribose 5-phosphate isomerase B.
    
 0.773
EGC75225.1
Hypothetical protein.
 
  
 0.707
EGC75230.1
Hypothetical protein.
 
     0.581
spoIIAB
Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
    
   0.571
EGC75224.1
Hypothetical protein; Belongs to the HpcH/HpaI aldolase family.
  
    0.557
EGC75205.1
Hypothetical protein.
  
  
 0.530
EGC75222.1
Hypothetical protein.
       0.524
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.