Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC74934.1Hypothetical protein. (521 aa)    
Predicted Functional Partners:
EGC74933.1
Hypothetical protein.
 
     0.946
EGC74932.1
Hypothetical protein.
 
    
0.817
EGC74938.1
Hypothetical protein.
 
  
 0.758
EGC74961.1
Hypothetical protein.
 
    0.751
EGC74963.1
Hypothetical protein.
  
    0.749
EGC74960.1
Hypothetical protein.
  
     0.735
EGC74959.1
Hypothetical protein.
  
     0.705
EGC74969.1
Hypothetical protein.
  
     0.693
EGC74953.1
HK97 family phage major capsid protein.
  
  
 0.692
EGC74955.1
Hypothetical protein.
 
   
 0.616
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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