Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC74957.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
EGC74956.1
Hypothetical protein.
       0.607
EGC74955.1
Hypothetical protein.
       0.587
EGC74953.1
HK97 family phage major capsid protein.
       0.566
EGC74954.1
Hypothetical protein; Belongs to the peptidase S14 family.
       0.561
EGC74959.1
Hypothetical protein.
       0.560
EGC74958.1
Hypothetical protein.
       0.559
EGC74960.1
Hypothetical protein.
       0.559
EGC74951.1
Phage head-tail adaptor.
       0.457
EGC74949.1
Hypothetical protein.
       0.440
EGC74950.1
Hypothetical protein.
       0.440
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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