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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC74792.1Hypothetical protein. (454 aa)    
Predicted Functional Partners:
EGC76226.1
Hypothetical protein.
 
  
 0.861
EGC76225.1
Hypothetical protein.
 
  
 0.847
EGC76227.1
Stage V sporulation protein AE.
 
   
 0.827
gpr
GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.789
EGC73428.1
Sporulation protein YabP.
  
   
 0.776
EGC75405.1
Hypothetical protein.
  
     0.771
EGC76219.1
Hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
 
   
 0.764
EGC74574.1
RNA polymerase sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.764
EGC74874.1
Stage IV sporulation protein A.
  
     0.763
EGC73425.1
Hypothetical protein.
  
     0.753
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.