Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC74697.1Hypothetical protein. (313 aa)    
Predicted Functional Partners:
EGC74706.1
Pyruvate:ferredoxin oxidoreductase.
     
 0.832
EGC74383.1
Hypothetical protein.
  
   0.625
EGC74696.1
Hypothetical protein.
 
     0.568
EGC74183.1
Hypothetical protein.
  
     0.529
EGC73406.1
Hypothetical protein.
  
 
   0.527
EGC73975.1
Hypothetical protein.
  
   0.511
EGC74855.1
Hypothetical protein.
  
     0.496
EGC76168.1
Hypothetical protein.
  
     0.482
EGC75988.1
Hypothetical protein.
  
     0.454
EGC75433.1
Hypothetical protein.
  
     0.452
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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