Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC74760.1Hypothetical protein. (303 aa)    
Predicted Functional Partners:
EGC74759.1
Hypothetical protein.
 
 
 0.982
EGC73854.1
Hypothetical protein.
 
 
 0.920
EGC73853.1
Formate acetyltransferase.
 
 
 0.812
EGC73363.1
Hypothetical protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.715
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.656
EGC74706.1
Pyruvate:ferredoxin oxidoreductase.
     
 0.614
EGC74761.1
Hypothetical protein.
 
     0.603
EGC74757.1
Hypothetical protein.
       0.543
EGC75653.1
Hypothetical protein.
   
    0.540
EGC75414.1
NADPH-dependent butanol dehydrogenase.
  
 
 0.516
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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