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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC74285.1Hypothetical protein; Belongs to the glycosyl hydrolase 13 family. (607 aa)    
Predicted Functional Partners:
EGC74286.1
4-alpha-glucanotransferase.
 
 0.984
EGC74289.1
Pullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 0.968
EGC73542.1
Hypothetical protein.
  
 
 0.934
EGC74284.1
Hypothetical protein.
 
 
0.915
EGC74287.1
Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.905
EGC74290.1
Hypothetical protein.
 
  
 0.895
EGC74292.1
Hypothetical protein.
 
  
 0.882
EGC74288.1
Glycogen debranching enzyme.
 
 
 0.874
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.868
EGC74291.1
Hypothetical protein.
 
    0.851
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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