Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC74387.1Hypothetical protein. (379 aa)    
Predicted Functional Partners:
EGC74386.1
Hypothetical protein.
 
   
 0.937
EGC74384.1
Hypothetical protein.
 
     0.932
EGC74385.1
Hypothetical protein.
 
     0.847
EGC73869.1
Hypothetical protein.
 
  
  0.663
EGC73971.1
Hypothetical protein.
  
  
  0.627
EGC76033.1
Hypothetical protein.
    
 0.561
EGC75841.1
Hypothetical protein; Converts alpha-aldose to the beta-anomer.
  
 
 0.559
EGC76165.1
Hypothetical protein.
     
  0.544
EGC73809.1
Hypothetical protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
     
  0.544
EGC73787.1
Hypothetical protein; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.501
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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