Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC74245.1Hypothetical protein. (434 aa)    
Predicted Functional Partners:
EGC74246.1
Hypothetical protein.
 
 
 0.932
EGC74248.1
Hypothetical protein.
  
     0.718
EGC73413.1
Hypothetical protein.
 
 
 0.702
EGC74857.1
Hypothetical protein.
  
     0.676
EGC73794.1
Hypothetical protein.
 
 
 0.655
EGC74785.1
Hypothetical protein.
 
 
 0.579
EGC74243.1
Hypothetical protein.
 
     0.567
EGC74244.1
Hypothetical protein.
       0.468
EGC74784.1
Hypothetical protein.
  
  
0.407
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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