Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC74232.1Hypothetical protein. (655 aa)    
Predicted Functional Partners:
EGC74785.1
Hypothetical protein.
 
 0.931
EGC74246.1
Hypothetical protein.
 
 0.930
EGC73794.1
Hypothetical protein.
 
 0.927
EGC74231.1
Hypothetical protein.
 
     0.893
EGC73413.1
Hypothetical protein.
 
 0.849
EGC74233.1
Hypothetical protein.
       0.773
EGC75421.1
Hypothetical protein.
 
 
  0.677
EGC74412.1
Hypothetical protein.
 
 
  0.662
EGC74226.1
Hypothetical protein.
 
 
  0.636
EGC75420.1
Hypothetical protein.
 
  
 
0.606
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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