Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC74101.1Hypothetical protein. (60 aa)    
Predicted Functional Partners:
EGC74102.1
Hypothetical protein.
       0.707
EGC74100.1
Hypothetical protein.
       0.621
EGC74099.1
Hypothetical protein; Belongs to the ParB family.
       0.616
EGC75122.1
Hypothetical protein.
  
 
  0.572
EGC74098.1
Hypothetical protein.
       0.440
EGC75891.1
Hypothetical protein.
     
 0.433
EGC75892.1
Hypothetical protein.
     
 0.433
EGC74097.1
Hypothetical protein.
       0.433
EGC74456.1
Hypothetical protein.
     
  0.401
lysS
Hypothetical protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.401
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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