Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC74173.1Hypothetical protein. (236 aa)    
Predicted Functional Partners:
EGC74174.1
Hypothetical protein.
       0.642
EGC75720.1
Hypothetical protein.
  
     0.586
EGC75722.1
Hypothetical protein.
  
     0.545
EGC75378.1
Hypothetical protein.
  
     0.501
EGC75721.1
Hypothetical protein.
  
     0.483
EGC74811.1
Hypothetical protein.
  
     0.481
EGC74140.1
Hypothetical protein.
  
     0.441
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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