Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC73894.1Hypothetical protein. (241 aa)    
Predicted Functional Partners:
EGC74993.1
Hypothetical protein.
  
 
 0.940
EGC73851.1
Hypothetical protein.
 
  
0.914
EGC73653.1
Hypothetical protein.
  
  
 0.853
EGC73915.1
Hypothetical protein.
  
 
 0.811
EGC75404.1
Hypothetical protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
  
  0.806
EGC76054.1
Hypothetical protein.
  
 
 0.805
EGC74515.1
Hypothetical protein.
  
 
 0.804
EGC73654.1
Hypothetical protein.
  
 
 0.804
EGC73918.1
Hypothetical protein.
  
  
  0.791
EGC75803.1
Hypothetical protein.
  
 
 0.790
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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