STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC73900.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
EGC73897.1
Hypothetical protein.
 
     0.940
EGC73903.1
Hypothetical protein.
 
  
 0.933
EGC73906.1
Hypothetical protein.
 
  
 0.929
EGC73899.1
Hypothetical protein.
 
     0.920
EGC73901.1
Hypothetical protein.
 
     0.887
EGC73904.1
Hypothetical protein.
 
  
 0.826
EGC73898.1
Hypothetical protein.
       0.782
EGC73387.1
Hypothetical protein.
  
     0.774
EGC73452.1
Hypothetical protein.
  
     0.774
EGC75751.1
Hypothetical protein.
  
     0.773
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.