Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC73956.1Hypothetical protein. (288 aa)    
Predicted Functional Partners:
EGC73955.1
Hypothetical protein.
  
 0.983
EGC73957.1
Hypothetical protein.
 
  0.969
EGC73954.1
Hypothetical protein.
 
     0.947
EGC74519.1
Hypothetical protein.
 
  0.551
EGC73961.1
Hypothetical protein.
 
     0.533
EGC73827.1
Hypothetical protein.
  
     0.491
EGC75951.1
Hypothetical protein.
  
  0.453
EGC75101.1
Hypothetical protein.
  
  0.446
EGC76179.1
Hypothetical protein.
  
  0.442
EGC73958.1
Hypothetical protein.
       0.426
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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