Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC73958.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
EGC73959.1
Hypothetical protein.
       0.773
EGC73960.1
Hypothetical protein.
       0.732
EGC76209.1
Hypothetical protein.
 
      0.682
EGC73493.1
Hypothetical protein.
  
  
 0.592
EGC73961.1
Hypothetical protein.
       0.453
EGC73956.1
Hypothetical protein.
       0.426
EGC73957.1
Hypothetical protein.
       0.426
EGC73955.1
Hypothetical protein.
       0.419
EGC73954.1
Hypothetical protein.
       0.409
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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