Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC73988.1Hypothetical protein. (511 aa)    
Predicted Functional Partners:
EGC73984.1
UDP-galactopyranose mutase.
 
  
 0.844
EGC74706.1
Pyruvate:ferredoxin oxidoreductase.
    
  0.811
EGC73989.1
Hypothetical protein.
  
  
 0.702
EGC73987.1
Hypothetical protein.
 
     0.692
EGC75205.1
Hypothetical protein.
  
  
 0.687
EGC75279.1
Hypothetical protein.
  
  
 0.662
EGC74616.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.662
EGC73985.1
Hypothetical protein.
 
     0.658
EGC73986.1
Hypothetical protein.
       0.625
EGC73990.1
Hypothetical protein.
       0.609
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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