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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC73993.1Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. (371 aa)    
Predicted Functional Partners:
EGC74616.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.935
EGC75205.1
Hypothetical protein.
  
 
 0.917
EGC74600.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
 
 0.897
EGC74612.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.830
EGC74002.1
Hypothetical protein.
 
 
 0.825
EGC75206.1
UDP-glucose 4-epimerase.
 
 
 0.731
EGC73991.1
Hypothetical protein.
  
 0.731
EGC75232.1
Hypothetical protein.
 
 
 0.727
EGC75980.1
Hypothetical protein.
 
 
 0.725
EGC74604.1
Hypothetical protein.
  
 
 0.691
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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