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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC74011.1Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family. (358 aa)    
Predicted Functional Partners:
EGC74013.1
Hypothetical protein.
 
 
 0.983
EGC74012.1
Hypothetical protein.
 
 
 0.979
EGC74010.1
Hypothetical protein.
 
    0.957
EGC74014.1
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 
0.935
EGC74998.1
Hypothetical protein.
  
 
 0.852
EGC74009.1
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
    
0.810
EGC75109.1
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
 
 0.802
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
 0.788
EGC74743.1
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 
0.782
EGC74554.1
Hypothetical protein.
  
 
 0.782
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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