Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC73653.1Hypothetical protein. (486 aa)    
Predicted Functional Partners:
EGC73654.1
Hypothetical protein.
 
 0.996
EGC74993.1
Hypothetical protein.
   
 0.944
EGC74118.1
Hypothetical protein.
 
 0.913
EGC73447.1
Hypothetical protein.
 
 
0.897
EGC73851.1
Hypothetical protein.
 
 
0.891
EGC73455.1
Hypothetical protein.
 
 0.880
EGC74982.1
Hypothetical protein.
 
 0.879
EGC75803.1
Hypothetical protein.
 
 0.872
EGC73448.1
Hypothetical protein.
 
 0.870
EGC76092.1
Hypothetical protein.
 
 0.866
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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