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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC73458.1Hypothetical protein; Belongs to the citrate synthase family. (456 aa)    
Predicted Functional Partners:
EGC74174.1
Hypothetical protein.
 
 0.996
EGC74706.1
Pyruvate:ferredoxin oxidoreductase.
  
 0.987
EGC75996.1
Isocitrate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 
 0.956
EGC75254.1
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.931
EGC74076.1
Hypothetical protein.
  
 
 0.929
EGC74077.1
Hypothetical protein.
  
 
 0.923
EGC76041.1
Hypothetical protein.
  
 0.910
EGC76025.1
Hypothetical protein.
  
 0.909
EGC74415.1
Hypothetical protein.
  
 
 0.902
EGC74463.1
acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.896
Your Current Organism:
Lachnospiraceae bacterium 6137FAA
NCBI taxonomy Id: 658656
Other names: L. bacterium 6_1_37FAA, Lachnospiraceae bacterium 6_1_37FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.