Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFP62919.1Hypothetical protein. (305 aa)    
Predicted Functional Partners:
EFP62918.1
Hypothetical protein.
       0.732
EFP60809.1
O-methyltransferase.
  
  
 0.706
EFP62920.1
Glycosyl hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family.
       0.687
EFP59895.1
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Belongs to the UbiD family.
  
 
 0.685
EFP59894.1
Polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase.
  
 
  0.651
EFP61161.1
Methyltransferase domain protein.
    
 0.648
EFP60640.1
Hypothetical protein.
    
 0.648
nifJ
Pyruvate synthase.
  
 
 0.640
EFP62043.1
4Fe-4S binding domain protein.
  
   0.602
EFP60767.1
Hypothetical protein.
  
   0.586
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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