Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFP62801.1PRD domain protein. (654 aa)    
Predicted Functional Partners:
mtlA
PTS system, mannitol-specific IIC component.
 
 
 0.865
EFP63068.1
PTS system, Lactose/Cellobiose specific IIB subunit.
 
 
 0.863
mtlA-2
PTS system mannitol-specific EIICB component (EIICB-Mtl) (EII-Mtl).
 
 
 0.857
EFP60911.1
PTS system, Lactose/Cellobiose specific IIB subunit; PTS system mannitol-specific EIICBA component (EIICBA-Mtl) (EII-Mtl).
  
 
 0.833
EFP62800.1
ROK family protein.
  
 
 0.829
EFP61124.1
PRD domain protein.
 
 
0.797
EFP63003.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
 
 0.796
EFP62024.1
PRD domain protein.
 
 
0.796
EFP62880.1
PRD domain protein.
 
 
0.795
EFP62770.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
 
0.795
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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