STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFP62163.1Hypothetical protein. (576 aa)    
Predicted Functional Partners:
EFP62761.1
Hypothetical protein.
  
     0.712
EFP63059.1
Hypothetical protein.
   
    0.670
EFP62494.1
[2Fe-2S]-binding domain protein.
   
    0.670
EFP62243.1
SUF system FeS assembly protein, NifU family.
   
    0.670
pheT
phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
   0.667
EFP60654.1
Hypothetical protein.
  
     0.628
EFP62295.1
Hypothetical protein.
  
     0.621
EFP61206.1
Diguanylate cyclase (GGDEF) domain protein.
 
 
   0.600
EFP60539.1
Hypothetical protein.
 
     0.557
EFP62945.1
Hypothetical protein.
 
  
 0.545
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.