Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
EFP61036.1Acetyltransferase, GNAT family. (157 aa)    
Predicted Functional Partners:
nifJ
Pyruvate synthase.
    
  0.867
EFP60478.1
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
    
 0.710
EFP62890.1
Putative chorismate mutase.
    
 0.702
EFP62891.1
Prephenate dehydratase.
    
 0.702
EFP60238.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.700
EFP60161.1
Aminotransferase, class I/II.
  
 
 0.683
EFP63119.1
Acetyltransferase, GNAT family.
  
 
 0.680
argD
Aminotransferase, acetylornithine/succinylornithine family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
 
 0.680
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
    
 0.664
EFP62483.1
Glutamine synthetase, beta-grasp domain protein.
    
 0.661
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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