Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFP61056.1NLPA lipoprotein; Belongs to the nlpA lipoprotein family. (278 aa)    
Predicted Functional Partners:
EFP61055.1
ABC transporter, permease protein.
 0.999
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.998
EFP60315.1
ABC transporter, permease protein.
  
 0.801
EFP61530.1
ABC transporter, ATP-binding protein.
  
 
 0.799
EFP60952.1
Homocysteine S-methyltransferase; FUSION: methionine sintase I (cobalamin dependent) and.
  
  
 0.779
EFP62744.1
ABC transporter, ATP-binding protein.
    
  0.752
EFP61702.1
ABC transporter, substrate-binding protein, QAT family.
  
 
 0.742
EFP60554.1
ABC transporter, substrate-binding protein, QAT family.
  
 
 0.742
EFP61999.1
Putative 2-aminoethylphosphonate ABC transporter, permease protein.
    
  0.738
EFP63142.1
TIGR00245 family protein.
     
  0.737
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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