Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFP61062.1ABC transporter, solute-binding protein. (438 aa)    
Predicted Functional Partners:
EFP62096.1
ABC transporter, permease protein.
  
 0.977
EFP62208.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.962
EFP62100.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.962
EFP60823.1
ABC transporter, ATP-binding protein.
  
 0.962
EFP62097.1
ABC transporter, permease protein.
  
 0.959
EFP61061.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
  
 0.944
EFP61702.1
ABC transporter, substrate-binding protein, QAT family.
  
 
 0.888
EFP60554.1
ABC transporter, substrate-binding protein, QAT family.
  
 
 0.888
EFP60315.1
ABC transporter, permease protein.
  
 
 0.861
EFP61401.1
ABC transporter, solute-binding protein.
 
  
  0.841
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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