STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFP61085.1Replication initiation and membrane attachment protein, DnaB/DnaD family. (394 aa)    
Predicted Functional Partners:
EFP60931.1
CamS sex pheromone family protein.
  
  
 0.846
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.843
ezrA
Septation ring formation regulator EzrA.
 
     0.778
EFP62282.1
DivIVA domain protein.
  
     0.764
EFP60208.1
Hypothetical protein.
  
     0.755
EFP62286.1
DnaD domain protein.
 
   
 0.740
EFP62673.1
DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
  
     0.719
yqeH
Ribosome biogenesis GTPase YqeH.
 
    0.712
EFP62275.1
Hypothetical protein.
 
   
 0.694
EFP62345.1
Prepilin-type cleavage/methylation N-terminal domain protein.
  
     0.691
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.