Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EFP61096.1Thermophilic metalloprotease (M29). (410 aa)    
Predicted Functional Partners:
EFP63175.1
Hydrolase, alpha/beta domain protein.
    
 0.711
EFP62990.1
Hypothetical protein.
    
 0.711
EFP61097.1
LemA family protein.
       0.511
EFP61098.1
Hypothetical protein.
       0.434
EFP63088.1
M42 glutamyl aminopeptidase.
  
  
 0.429
EFP62264.1
M42 glutamyl aminopeptidase.
  
  
 0.429
pepF
Oligoendopeptidase F.
 
   
 0.425
EFP60860.1
Carboxypeptidase Taq (M32) metallopeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
  
  
 0.419
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
  
 0.407
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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