Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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deoC-4Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (239 aa)    
Predicted Functional Partners:
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
  
 
 0.916
nifJ
Pyruvate synthase.
  
 
  0.895
EFP61519.1
PTS system, glucose-like IIB component.
    
 0.853
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.853
EFP60853.1
Phosphotransferase system, EIIC.
    
 0.853
ptbA-4
PTS system, glucose subfamily, IIA component.
    
 0.853
EFP60112.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; PTS system sucrose-specific EIIBCA component (EIIBCA-Scr) (EII-Scr).
    
 0.853
EFP60114.1
Phosphotransferase system, EIIC; PTS system beta-glucoside-specific EIIBCA component (EIIBCA-Bgl) (EII-Bgl).
    
 0.853
pdp
Pyrimidine-nucleoside phosphorylase.
  
 
 0.796
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 0.789
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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