Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFP60409.1Hypothetical protein. (60 aa)    
Predicted Functional Partners:
EFP60406.1
Hypothetical protein.
 
     0.879
EFP60407.1
Hypothetical protein.
 
     0.879
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 0.860
EFP63024.1
Hypothetical protein.
  
     0.774
EFP62166.1
Hypothetical protein.
  
     0.774
EFP61471.1
Hypothetical protein.
  
     0.774
EFP61472.1
Hypothetical protein.
  
     0.774
EFP61051.1
Hypothetical protein.
  
     0.774
EFP61052.1
Hypothetical protein.
  
     0.774
EFP61053.1
Hypothetical protein.
  
     0.774
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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