Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFP60394.1Carbohydrate kinase, FGGY family protein. (478 aa)    
Predicted Functional Partners:
EFP60393.1
Putative L-ribulose-5-phosphate 4-epimerase.
  
 
 0.957
EFP62823.1
Putative xylose isomerase.
 
 
 0.888
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
 
 0.886
EFP63051.1
Putative rhamnulose-1-phosphate aldolase.
  
 
 0.860
EFP62737.1
Putative rhamnulose-1-phosphate aldolase.
  
 
 0.858
EFP63038.1
Putative L-ribulose-5-phosphate 4-epimerase.
  
 
 0.841
EFP63010.1
Putative L-ribulose-5-phosphate 4-epimerase.
  
 
 0.841
araD
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.841
pdxB-12
4-phosphoerythronate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
    0.834
EFP59941.1
Putative ribulose-phosphate 3-epimerase.
   
 0.806
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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