Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFP60280.1Glycosyl hydrolase family 25. (298 aa)    
Predicted Functional Partners:
EFP61672.1
Putative peptidoglycan binding domain protein.
    
 0.675
pbpB
Penicillin-binding protein 2B.
    
 0.646
EFP62351.1
Penicillin-binding protein, transpeptidase domain protein.
    
 0.639
EFP61951.1
Penicillin-binding protein, transpeptidase domain protein.
    
 0.639
EFP60807.1
Serine-type D-Ala-D-Ala carboxypeptidase.
    
  0.622
EFP63352.1
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
    
 0.611
EFP62388.1
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
    
 0.611
EFP61778.1
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
    
 0.611
EFP62670.1
Transglycosylase.
    
 0.602
EFP62283.1
Transglycosylase.
    
 0.602
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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