Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFP60248.1Chromate transport protein; Overlaps another CDS with the same product name. (187 aa)    
Predicted Functional Partners:
EFP60247.1
Chromate transport protein; Overlaps another CDS with the same product name.
 
   
0.925
EFP60453.1
Chromate transport protein; Overlaps another CDS with the same product name.
 
   
0.682
EFP60525.1
Chromate transport protein; Overlaps another CDS with the same product name.
 
   
0.679
EFP60249.1
LysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family.
 
     0.629
pepD
Aminoacyl-histidine dipeptidase (Xaa-His dipeptidase)(X-His dipeptidase) (Beta-alanyl-histidine dipeptidase) (Carnosinase)(Cysteinylglycinase) (Peptidase D).
       0.487
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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