Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFP60250.1ABC transporter, solute-binding protein. (631 aa)    
Predicted Functional Partners:
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.999
EFP60824.1
ABC transporter, permease protein.
 
 0.994
EFP61998.1
ABC transporter, ATP-binding protein.
 
 0.974
EFP61997.1
ABC transporter, solute-binding protein.
    
 0.814
EFP60823.1
ABC transporter, ATP-binding protein.
 
  
 0.813
EFP62208.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.805
EFP62100.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.790
EFP60315.1
ABC transporter, permease protein.
 
 
 0.760
EFP62097.1
ABC transporter, permease protein.
 
 
 0.745
EFP60777.1
ABC transporter, ATP-binding protein.
 
  
 0.745
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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