Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFP60227.1Hypothetical protein. (496 aa)    
Predicted Functional Partners:
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.957
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.927
EFP60488.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.888
nifJ
Pyruvate synthase.
    
 0.871
EFP60222.1
Glycosyltransferase, group 1 family protein.
 
 
 0.832
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
  
 
 0.800
EFP62632.1
Hypothetical protein.
  
 
 0.795
EFP62634.1
Hypothetical protein.
  
 
 0.795
EFP60366.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
  
 
 0.795
EFP60300.1
Glycosyltransferase, group 1 family protein.
  
 
 0.795
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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