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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFP60172.1Cell envelope-like function transcriptional attenuator common domain protein. (503 aa)    
Predicted Functional Partners:
EFP60171.1
Hypothetical protein.
 
     0.662
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
 
   
 0.610
EFP61507.1
Dockerin type I repeat protein.
 
   
 0.560
EFP62854.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase.
 
   
 0.541
EFP62108.1
Bacterial group 3 Ig-like protein.
 
   
 0.518
EFP62490.1
Mur ligase middle domain protein.
 
  
 0.493
pbpB
Penicillin-binding protein 2B.
 
   
 0.486
EFP62614.1
comEA protein.
 
     0.438
EFP59905.1
Glycosyltransferase, group 4 family.
 
  
 0.437
EFP61621.1
Hypothetical protein.
  
     0.422
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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