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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFP60178.1Hypothetical protein. (731 aa)    
Predicted Functional Partners:
EFP60179.1
Hypothetical protein.
 
     0.883
EFP60184.1
Hypothetical protein.
 
     0.878
EFP60186.1
Phage tail sheath protein.
 
     0.858
EFP60187.1
Conserved hypothetical phage tail region protein.
 
     0.858
EFP60188.1
Hypothetical protein.
 
     0.846
EFP60190.1
Conserved hypothetical phage tail region protein.
 
     0.813
EFP60195.1
Hypothetical protein.
 
     0.780
EFP60196.1
Putative lysozyme.
 
     0.775
EFP60200.1
ATPase, AAA family.
 
     0.771
EFP60198.1
Hypothetical protein.
  
     0.738
Your Current Organism:
Erysipelotrichaceae bacterium 3153
NCBI taxonomy Id: 658659
Other names: E. bacterium 3_1_53, Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichaceae bacterium str. 3_1_53, Erysipelotrichaceae bacterium strain 3_1_53
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