Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMZ52892.1 | KMZ54813.1 | HMPREF0980_02754 | HMPREF0980_01225 | succinyl-CoA synthase, beta subunit. | Protein FdrA. | 0.998 |
KMZ52892.1 | KMZ55529.1 | HMPREF0980_02754 | HMPREF0980_00226 | succinyl-CoA synthase, beta subunit. | Putative modification methylase MvaI (N-4 cytosine-specificmethyltransferase MvaI) (M.MvaI). | 0.525 |
KMZ52892.1 | sucD | HMPREF0980_02754 | HMPREF0980_02755 | succinyl-CoA synthase, beta subunit. | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.999 |
KMZ54813.1 | KMZ52892.1 | HMPREF0980_01225 | HMPREF0980_02754 | Protein FdrA. | succinyl-CoA synthase, beta subunit. | 0.998 |
KMZ54813.1 | KMZ55529.1 | HMPREF0980_01225 | HMPREF0980_00226 | Protein FdrA. | Putative modification methylase MvaI (N-4 cytosine-specificmethyltransferase MvaI) (M.MvaI). | 0.491 |
KMZ55528.1 | KMZ55529.1 | HMPREF0980_00225 | HMPREF0980_00226 | Putative toxin-antitoxin system, toxin component. | Putative modification methylase MvaI (N-4 cytosine-specificmethyltransferase MvaI) (M.MvaI). | 0.430 |
KMZ55529.1 | KMZ52892.1 | HMPREF0980_00226 | HMPREF0980_02754 | Putative modification methylase MvaI (N-4 cytosine-specificmethyltransferase MvaI) (M.MvaI). | succinyl-CoA synthase, beta subunit. | 0.525 |
KMZ55529.1 | KMZ54813.1 | HMPREF0980_00226 | HMPREF0980_01225 | Putative modification methylase MvaI (N-4 cytosine-specificmethyltransferase MvaI) (M.MvaI). | Protein FdrA. | 0.491 |
KMZ55529.1 | KMZ55528.1 | HMPREF0980_00226 | HMPREF0980_00225 | Putative modification methylase MvaI (N-4 cytosine-specificmethyltransferase MvaI) (M.MvaI). | Putative toxin-antitoxin system, toxin component. | 0.430 |
KMZ55529.1 | lon | HMPREF0980_00226 | HMPREF0980_00341 | Putative modification methylase MvaI (N-4 cytosine-specificmethyltransferase MvaI) (M.MvaI). | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.546 |
KMZ55529.1 | sucD | HMPREF0980_00226 | HMPREF0980_02755 | Putative modification methylase MvaI (N-4 cytosine-specificmethyltransferase MvaI) (M.MvaI). | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.491 |
lon | KMZ55529.1 | HMPREF0980_00341 | HMPREF0980_00226 | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | Putative modification methylase MvaI (N-4 cytosine-specificmethyltransferase MvaI) (M.MvaI). | 0.546 |
sucD | KMZ52892.1 | HMPREF0980_02755 | HMPREF0980_02754 | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | succinyl-CoA synthase, beta subunit. | 0.999 |
sucD | KMZ55529.1 | HMPREF0980_02755 | HMPREF0980_00226 | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | Putative modification methylase MvaI (N-4 cytosine-specificmethyltransferase MvaI) (M.MvaI). | 0.491 |