Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KMZ55597.1Transcriptional regulator, MerR family. (256 aa)    
Predicted Functional Partners:
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
   
  0.788
KMZ55650.1
Transcriptional regulator of the BltD operon.
  
     0.717
KMZ54942.1
Putative hybrid sensory kinase.
   
 0.704
KMZ55477.1
Putative precorrin-6y c5,15-methyltransferase.
     
  0.689
KMZ55810.1
Transcriptional regulator, MerR family.
  
     0.639
KMZ52642.1
Putative transcriptional regulator, MerR family.
  
     0.636
KMZ53748.1
Glutamine synthetase, type I.
 
 
 0.551
KMZ53784.1
Putative transcriptional regulator, MerR family.
  
     0.526
KMZ52906.1
Transporter, major facilitator family.
  
     0.516
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
   0.512
Your Current Organism:
Dorea sp. D27
NCBI taxonomy Id: 658665
Other names: D. sp. D27
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